Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm15820-201ENSMUST00000201566 728 ntBASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Grk6-206ENSMUST00000224995 2971 ntBASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav15-2-dv6-2A0A075B650 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav15-2-dv6-2A0A075B650 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms