Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-2A0A075B649 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-2A0A075B649 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-2A0A075B649 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav13-2A0A075B649 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13-2A0A075B649 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC12.77□□□□□ -0.36
Trav13-2A0A075B649 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-2A0A075B649 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav13-2A0A075B649 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-2A0A075B649 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-2A0A075B649 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-2A0A075B649 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-2A0A075B649 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-2A0A075B649 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13-2A0A075B649 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-2A0A075B649 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Gm43530-201ENSMUST00000195920 274 ntBASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-2A0A075B649 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Etf1-202ENSMUST00000180351 108 ntBASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.74□□□□□ -0.37
Trav13-2A0A075B649 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms