Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav1A0A075B5Z4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Gm27801-201ENSMUST00000184174 223 ntBASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Gm27454-201ENSMUST00000185090 204 ntBASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav1A0A075B5Z4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trav1A0A075B5Z4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Gm7860-201ENSMUST00000121190 879 ntBASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav1A0A075B5Z4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav1A0A075B5Z4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav1A0A075B5Z4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Gm6139-201ENSMUST00000079261 882 ntBASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav1A0A075B5Z4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav1A0A075B5Z4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav1A0A075B5Z4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Trav1A0A075B5Z4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.68■□□□□ 0.42
Trav1A0A075B5Z4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav1A0A075B5Z4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.68■□□□□ 0.42
Trav1A0A075B5Z4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav1A0A075B5Z4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav1A0A075B5Z4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav1A0A075B5Z4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms