Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcb1Q9Z0H3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcb1Q9Z0H3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcb1Q9Z0H3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.86■□□□□ 0.77
Smarcb1Q9Z0H3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcb1Q9Z0H3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcb1Q9Z0H3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcb1Q9Z0H3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Gm12441-201ENSMUST00000121806 588 ntBASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Gm6211-202ENSMUST00000167849 925 ntBASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcb1Q9Z0H3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcb1Q9Z0H3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.83■□□□□ 0.77
Smarcb1Q9Z0H3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcb1Q9Z0H3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.83■□□□□ 0.77
Smarcb1Q9Z0H3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcb1Q9Z0H3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.83■□□□□ 0.77
Smarcb1Q9Z0H3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcb1Q9Z0H3 Gm4968-201ENSMUST00000071458 858 ntBASIC19.83■□□□□ 0.77
Smarcb1Q9Z0H3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcb1Q9Z0H3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcb1Q9Z0H3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Smarcb1Q9Z0H3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcb1Q9Z0H3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smarcb1Q9Z0H3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Smarcb1Q9Z0H3 Gm13148-201ENSMUST00000118892 745 ntBASIC19.82■□□□□ 0.76
Smarcb1Q9Z0H3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcb1Q9Z0H3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Smarcb1Q9Z0H3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcb1Q9Z0H3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.81■□□□□ 0.76
Smarcb1Q9Z0H3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcb1Q9Z0H3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms