Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Gm6420-201ENSMUST00000193885 723 ntBASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col13a1Q9R1N9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col13a1Q9R1N9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col13a1Q9R1N9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.21■□□□□ 0.18
Col13a1Q9R1N9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col13a1Q9R1N9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col13a1Q9R1N9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col13a1Q9R1N9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col13a1Q9R1N9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Mir6236-201ENSMUST00000184437 123 ntBASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col13a1Q9R1N9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col13a1Q9R1N9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.15■□□□□ 0.18
Col13a1Q9R1N9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms