Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh17Q9R100 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.65■□□□□ 0.58
Cdh17Q9R100 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh17Q9R100 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdh17Q9R100 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Cdh17Q9R100 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh17Q9R100 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh17Q9R100 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cdh17Q9R100 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh17Q9R100 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cdh17Q9R100 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh17Q9R100 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh17Q9R100 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cdh17Q9R100 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh17Q9R100 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh17Q9R100 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh17Q9R100 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh17Q9R100 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh17Q9R100 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.63■□□□□ 0.57
Cdh17Q9R100 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.63■□□□□ 0.57
Cdh17Q9R100 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh17Q9R100 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh17Q9R100 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cdh17Q9R100 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.63■□□□□ 0.57
Cdh17Q9R100 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cdh17Q9R100 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cdh17Q9R100 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh17Q9R100 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.62■□□□□ 0.57
Cdh17Q9R100 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.62■□□□□ 0.57
Cdh17Q9R100 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.62■□□□□ 0.57
Cdh17Q9R100 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.62■□□□□ 0.57
Cdh17Q9R100 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cdh17Q9R100 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh17Q9R100 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh17Q9R100 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh17Q9R100 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh17Q9R100 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.61■□□□□ 0.57
Cdh17Q9R100 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.61■□□□□ 0.57
Cdh17Q9R100 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh17Q9R100 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cdh17Q9R100 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Cdh17Q9R100 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.61■□□□□ 0.57
Cdh17Q9R100 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh17Q9R100 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh17Q9R100 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.61■□□□□ 0.57
Cdh17Q9R100 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh17Q9R100 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh17Q9R100 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.6■□□□□ 0.57
Cdh17Q9R100 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.6■□□□□ 0.57
Cdh17Q9R100 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh17Q9R100 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh17Q9R100 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cdh17Q9R100 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cdh17Q9R100 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdh17Q9R100 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.59■□□□□ 0.57
Cdh17Q9R100 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cdh17Q9R100 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.59■□□□□ 0.57
Cdh17Q9R100 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh17Q9R100 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Cdh17Q9R100 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh17Q9R100 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh17Q9R100 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh17Q9R100 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh17Q9R100 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh17Q9R100 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh17Q9R100 Gm21956-201ENSMUST00000179946 522 ntBASIC18.58■□□□□ 0.56
Cdh17Q9R100 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh17Q9R100 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh17Q9R100 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.58■□□□□ 0.56
Cdh17Q9R100 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh17Q9R100 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh17Q9R100 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh17Q9R100 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh17Q9R100 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh17Q9R100 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh17Q9R100 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh17Q9R100 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh17Q9R100 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms