Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr4Q9QUK6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr4Q9QUK6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr4Q9QUK6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr4Q9QUK6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.76■□□□□ 0.59
Tlr4Q9QUK6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr4Q9QUK6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr4Q9QUK6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr4Q9QUK6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr4Q9QUK6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr4Q9QUK6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 Gm13146-201ENSMUST00000118508 780 ntBASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr4Q9QUK6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Gm38205-201ENSMUST00000192243 258 ntBASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr4Q9QUK6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr4Q9QUK6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tlr4Q9QUK6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tlr4Q9QUK6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tlr4Q9QUK6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Tlr4Q9QUK6 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.72■□□□□ 0.59
Tlr4Q9QUK6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tlr4Q9QUK6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tlr4Q9QUK6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Tlr4Q9QUK6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.72■□□□□ 0.59
Tlr4Q9QUK6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Gm12933-201ENSMUST00000120203 872 ntBASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tlr4Q9QUK6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.71■□□□□ 0.58
Tlr4Q9QUK6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr4Q9QUK6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.7■□□□□ 0.58
Tlr4Q9QUK6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.7■□□□□ 0.58
Tlr4Q9QUK6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr4Q9QUK6 Gm10602-201ENSMUST00000098239 609 ntBASIC18.7■□□□□ 0.58
Tlr4Q9QUK6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.7■□□□□ 0.58
Tlr4Q9QUK6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.7■□□□□ 0.58
Tlr4Q9QUK6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tlr4Q9QUK6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr4Q9QUK6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Tlr4Q9QUK6 Golph3-202ENSMUST00000226517 2359 ntBASIC18.69■□□□□ 0.58
Tlr4Q9QUK6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms