Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prg4Q9JM99 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prg4Q9JM99 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.43■□□□□ 0.38
Prg4Q9JM99 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prg4Q9JM99 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prg4Q9JM99 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.42■□□□□ 0.38
Prg4Q9JM99 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prg4Q9JM99 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prg4Q9JM99 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prg4Q9JM99 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prg4Q9JM99 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.42■□□□□ 0.38
Prg4Q9JM99 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prg4Q9JM99 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prg4Q9JM99 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Gm7290-201ENSMUST00000104990 617 ntBASIC17.41■□□□□ 0.38
Prg4Q9JM99 Gm12918-201ENSMUST00000120234 636 ntBASIC17.41■□□□□ 0.38
Prg4Q9JM99 Gm15710-201ENSMUST00000121821 636 ntBASIC17.41■□□□□ 0.38
Prg4Q9JM99 Gm5075-201ENSMUST00000196916 622 ntBASIC17.41■□□□□ 0.38
Prg4Q9JM99 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.41■□□□□ 0.38
Prg4Q9JM99 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.41■□□□□ 0.38
Prg4Q9JM99 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prg4Q9JM99 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.4■□□□□ 0.38
Prg4Q9JM99 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prg4Q9JM99 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Prg4Q9JM99 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Prg4Q9JM99 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Prg4Q9JM99 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.39■□□□□ 0.37
Prg4Q9JM99 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.38■□□□□ 0.37
Prg4Q9JM99 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prg4Q9JM99 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prg4Q9JM99 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prg4Q9JM99 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prg4Q9JM99 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms