Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Copb1Q9JIF7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Copb1Q9JIF7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Copb1Q9JIF7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Copb1Q9JIF7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Copb1Q9JIF7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Copb1Q9JIF7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Copb1Q9JIF7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
Copb1Q9JIF7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Copb1Q9JIF7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Copb1Q9JIF7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Copb1Q9JIF7 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.89■□□□□ 0.93
Copb1Q9JIF7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Copb1Q9JIF7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Copb1Q9JIF7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Copb1Q9JIF7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Copb1Q9JIF7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Copb1Q9JIF7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Spcs1-204ENSMUST00000226782 949 ntBASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Copb1Q9JIF7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Copb1Q9JIF7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Copb1Q9JIF7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Copb1Q9JIF7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms