Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nif3l1Q9EQ80 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Iqck-206ENSMUST00000208658 2891 ntBASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nif3l1Q9EQ80 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.96■□□□□ 0.63
Nif3l1Q9EQ80 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nif3l1Q9EQ80 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nif3l1Q9EQ80 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nif3l1Q9EQ80 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nif3l1Q9EQ80 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.96■□□□□ 0.63
Nif3l1Q9EQ80 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.96■□□□□ 0.63
Nif3l1Q9EQ80 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nif3l1Q9EQ80 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nif3l1Q9EQ80 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nif3l1Q9EQ80 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nif3l1Q9EQ80 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nif3l1Q9EQ80 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nif3l1Q9EQ80 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nif3l1Q9EQ80 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Nif3l1Q9EQ80 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nif3l1Q9EQ80 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nif3l1Q9EQ80 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nif3l1Q9EQ80 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Gm7860-201ENSMUST00000121190 879 ntBASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nif3l1Q9EQ80 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nif3l1Q9EQ80 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nif3l1Q9EQ80 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nif3l1Q9EQ80 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nif3l1Q9EQ80 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nif3l1Q9EQ80 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nif3l1Q9EQ80 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nif3l1Q9EQ80 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms