Protein–RNA interactions for Protein: Q9EQ41

Vmn1r29, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r29Q9EQ41 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vmn1r29Q9EQ41 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r29Q9EQ41 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vmn1r29Q9EQ41 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Vmn1r29Q9EQ41 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.7■□□□□ 0.42
Vmn1r29Q9EQ41 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.69■□□□□ 0.42
Vmn1r29Q9EQ41 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r29Q9EQ41 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Gm12922-201ENSMUST00000120626 809 ntBASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r29Q9EQ41 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vmn1r29Q9EQ41 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r29Q9EQ41 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Vmn1r29Q9EQ41 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vmn1r29Q9EQ41 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vmn1r29Q9EQ41 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vmn1r29Q9EQ41 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms