Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2aQ9DB34 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2aQ9DB34 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp2aQ9DB34 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp2aQ9DB34 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chmp2aQ9DB34 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2aQ9DB34 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2aQ9DB34 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2aQ9DB34 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2aQ9DB34 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.88■□□□□ 0.77
Chmp2aQ9DB34 Gm5874-201ENSMUST00000096101 508 ntBASIC19.88■□□□□ 0.77
Chmp2aQ9DB34 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2aQ9DB34 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2aQ9DB34 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2aQ9DB34 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2aQ9DB34 Notumos-201ENSMUST00000151998 2659 ntBASIC19.87■□□□□ 0.77
Chmp2aQ9DB34 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.87■□□□□ 0.77
Chmp2aQ9DB34 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2aQ9DB34 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Chmp2aQ9DB34 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Chmp2aQ9DB34 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2aQ9DB34 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chmp2aQ9DB34 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2aQ9DB34 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2aQ9DB34 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.86■□□□□ 0.77
Chmp2aQ9DB34 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2aQ9DB34 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Chmp2aQ9DB34 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2aQ9DB34 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Chmp2aQ9DB34 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Chmp2aQ9DB34 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Gm18284-201ENSMUST00000172604 624 ntBASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Gm10493-201ENSMUST00000097270 612 ntBASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2aQ9DB34 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp2aQ9DB34 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms