Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Llcfc1Q9D9P8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Llcfc1Q9D9P8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.12■□□□□ 0.81
Llcfc1Q9D9P8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Llcfc1Q9D9P8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Llcfc1Q9D9P8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Llcfc1Q9D9P8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Llcfc1Q9D9P8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Llcfc1Q9D9P8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Llcfc1Q9D9P8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Llcfc1Q9D9P8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Llcfc1Q9D9P8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Llcfc1Q9D9P8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Llcfc1Q9D9P8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Llcfc1Q9D9P8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Llcfc1Q9D9P8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Llcfc1Q9D9P8 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.1■□□□□ 0.81
Llcfc1Q9D9P8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Llcfc1Q9D9P8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Spcs1-204ENSMUST00000226782 949 ntBASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Llcfc1Q9D9P8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Llcfc1Q9D9P8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Llcfc1Q9D9P8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Llcfc1Q9D9P8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Llcfc1Q9D9P8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Llcfc1Q9D9P8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Llcfc1Q9D9P8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.08■□□□□ 0.81
Llcfc1Q9D9P8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Llcfc1Q9D9P8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Llcfc1Q9D9P8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Llcfc1Q9D9P8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Llcfc1Q9D9P8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Llcfc1Q9D9P8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Llcfc1Q9D9P8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Llcfc1Q9D9P8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Llcfc1Q9D9P8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Llcfc1Q9D9P8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Llcfc1Q9D9P8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Llcfc1Q9D9P8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Llcfc1Q9D9P8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Llcfc1Q9D9P8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Llcfc1Q9D9P8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Llcfc1Q9D9P8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Llcfc1Q9D9P8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Llcfc1Q9D9P8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Llcfc1Q9D9P8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Llcfc1Q9D9P8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Llcfc1Q9D9P8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Llcfc1Q9D9P8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms