Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Gm7860-201ENSMUST00000121190 879 ntBASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Tmem54Q9D7S1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tmem54Q9D7S1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tmem54Q9D7S1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tmem54Q9D7S1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Tmem54Q9D7S1 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.77■□□□□ 0.27
Tmem54Q9D7S1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tmem54Q9D7S1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tmem54Q9D7S1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Reep4-203ENSMUST00000226563 1444 ntBASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tmem54Q9D7S1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tmem54Q9D7S1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 Gm38205-201ENSMUST00000192243 258 ntBASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tmem54Q9D7S1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Gm8495-201ENSMUST00000188740 694 ntBASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Gm42778-201ENSMUST00000199644 553 ntBASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Tmem54Q9D7S1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tmem54Q9D7S1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Gm13234-201ENSMUST00000120010 747 ntBASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Gm42642-201ENSMUST00000200683 355 ntBASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.71■□□□□ 0.27
Tmem54Q9D7S1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Tmem54Q9D7S1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms