Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim42Q9D2H5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim42Q9D2H5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim42Q9D2H5 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.04■□□□□ 0.64
Trim42Q9D2H5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim42Q9D2H5 Gm43566-201ENSMUST00000196851 808 ntBASIC19.04■□□□□ 0.64
Trim42Q9D2H5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim42Q9D2H5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim42Q9D2H5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim42Q9D2H5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim42Q9D2H5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim42Q9D2H5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.02■□□□□ 0.63
Trim42Q9D2H5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Trim42Q9D2H5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim42Q9D2H5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Trim42Q9D2H5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim42Q9D2H5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim42Q9D2H5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim42Q9D2H5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 BC021767-201ENSMUST00000126387 1716 ntBASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Gm10232-201ENSMUST00000089221 720 ntBASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim42Q9D2H5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim42Q9D2H5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trim42Q9D2H5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim42Q9D2H5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim42Q9D2H5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim42Q9D2H5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19■□□□□ 0.63
Trim42Q9D2H5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trim42Q9D2H5 AA386476-201ENSMUST00000098781 1665 ntBASIC19■□□□□ 0.63
Trim42Q9D2H5 Gm45640-201ENSMUST00000210665 1896 ntBASIC19■□□□□ 0.63
Trim42Q9D2H5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim42Q9D2H5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim42Q9D2H5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim42Q9D2H5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim42Q9D2H5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim42Q9D2H5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms