Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rita1Q9D1H0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.68■□□□□ 0.42
Rita1Q9D1H0 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.68■□□□□ 0.42
Rita1Q9D1H0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rita1Q9D1H0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rita1Q9D1H0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rita1Q9D1H0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rita1Q9D1H0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Gm7514-201ENSMUST00000209475 934 ntBASIC17.67■□□□□ 0.42
Rita1Q9D1H0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rita1Q9D1H0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rita1Q9D1H0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Gm29257-201ENSMUST00000186115 639 ntBASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rita1Q9D1H0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rita1Q9D1H0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rita1Q9D1H0 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.64■□□□□ 0.41
Rita1Q9D1H0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rita1Q9D1H0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rita1Q9D1H0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rita1Q9D1H0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.64■□□□□ 0.41
Rita1Q9D1H0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rita1Q9D1H0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.64■□□□□ 0.41
Rita1Q9D1H0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rita1Q9D1H0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rita1Q9D1H0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rita1Q9D1H0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.62■□□□□ 0.41
Rita1Q9D1H0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rita1Q9D1H0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.62■□□□□ 0.41
Rita1Q9D1H0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Gm13534-201ENSMUST00000121169 513 ntBASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rita1Q9D1H0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rita1Q9D1H0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms