Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cthrc1Q9D1D6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cthrc1Q9D1D6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cthrc1Q9D1D6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cthrc1Q9D1D6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cthrc1Q9D1D6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cthrc1Q9D1D6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cthrc1Q9D1D6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.81■□□□□ 0.44
Cthrc1Q9D1D6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cthrc1Q9D1D6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cthrc1Q9D1D6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cthrc1Q9D1D6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cthrc1Q9D1D6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.8■□□□□ 0.44
Cthrc1Q9D1D6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cthrc1Q9D1D6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.8■□□□□ 0.44
Cthrc1Q9D1D6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cthrc1Q9D1D6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Gm42642-201ENSMUST00000200683 355 ntBASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cthrc1Q9D1D6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cthrc1Q9D1D6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cthrc1Q9D1D6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Cthrc1Q9D1D6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Gm7291-201ENSMUST00000199147 382 ntBASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Cthrc1Q9D1D6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cthrc1Q9D1D6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cthrc1Q9D1D6 Gm10849-201ENSMUST00000100397 618 ntBASIC17.75■□□□□ 0.43
Cthrc1Q9D1D6 Gm42569-201ENSMUST00000200539 472 ntBASIC17.75■□□□□ 0.43
Cthrc1Q9D1D6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.75■□□□□ 0.43
Cthrc1Q9D1D6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.75■□□□□ 0.43
Cthrc1Q9D1D6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cthrc1Q9D1D6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cthrc1Q9D1D6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cthrc1Q9D1D6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cthrc1Q9D1D6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms