Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snf8Q9CZ28 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snf8Q9CZ28 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snf8Q9CZ28 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snf8Q9CZ28 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.64■□□□□ 0.73
Snf8Q9CZ28 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Serp2-204ENSMUST00000228055 705 ntBASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snf8Q9CZ28 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snf8Q9CZ28 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Snf8Q9CZ28 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snf8Q9CZ28 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snf8Q9CZ28 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snf8Q9CZ28 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snf8Q9CZ28 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snf8Q9CZ28 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snf8Q9CZ28 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snf8Q9CZ28 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.59■□□□□ 0.73
Snf8Q9CZ28 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Snf8Q9CZ28 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.59■□□□□ 0.73
Snf8Q9CZ28 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Snf8Q9CZ28 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snf8Q9CZ28 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Snf8Q9CZ28 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Snf8Q9CZ28 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.58■□□□□ 0.72
Snf8Q9CZ28 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Snf8Q9CZ28 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snf8Q9CZ28 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snf8Q9CZ28 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snf8Q9CZ28 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snf8Q9CZ28 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Snf8Q9CZ28 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snf8Q9CZ28 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Snf8Q9CZ28 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snf8Q9CZ28 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.57■□□□□ 0.72
Snf8Q9CZ28 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.57■□□□□ 0.72
Snf8Q9CZ28 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.57■□□□□ 0.72
Snf8Q9CZ28 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Snf8Q9CZ28 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms