Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Rnaseh2aQ9CWY8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnaseh2aQ9CWY8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rnaseh2aQ9CWY8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnaseh2aQ9CWY8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnaseh2aQ9CWY8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC23.05■■□□□ 1.28
Rnaseh2aQ9CWY8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC23.05■■□□□ 1.28
Rnaseh2aQ9CWY8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnaseh2aQ9CWY8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.04■■□□□ 1.28
Rnaseh2aQ9CWY8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Rnaseh2aQ9CWY8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnaseh2aQ9CWY8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnaseh2aQ9CWY8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Rnaseh2aQ9CWY8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnaseh2aQ9CWY8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnaseh2aQ9CWY8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnaseh2aQ9CWY8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnaseh2aQ9CWY8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnaseh2aQ9CWY8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnaseh2aQ9CWY8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnaseh2aQ9CWY8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnaseh2aQ9CWY8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Rnaseh2aQ9CWY8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnaseh2aQ9CWY8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rnaseh2aQ9CWY8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.03■■□□□ 1.28
Rnaseh2aQ9CWY8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 Gm13559-201ENSMUST00000120476 863 ntBASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rnaseh2aQ9CWY8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnaseh2aQ9CWY8 Gm43909-201ENSMUST00000203443 1876 ntBASIC23■■□□□ 1.27
Rnaseh2aQ9CWY8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Rnaseh2aQ9CWY8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC23■■□□□ 1.27
Rnaseh2aQ9CWY8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnaseh2aQ9CWY8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnaseh2aQ9CWY8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnaseh2aQ9CWY8 Gm21814-202ENSMUST00000203277 873 ntBASIC22.99■■□□□ 1.27
Rnaseh2aQ9CWY8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.99■■□□□ 1.27
Rnaseh2aQ9CWY8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnaseh2aQ9CWY8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rnaseh2aQ9CWY8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rnaseh2aQ9CWY8 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.98■■□□□ 1.27
Rnaseh2aQ9CWY8 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.98■■□□□ 1.27
Rnaseh2aQ9CWY8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rnaseh2aQ9CWY8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnaseh2aQ9CWY8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rnaseh2aQ9CWY8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnaseh2aQ9CWY8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Rnaseh2aQ9CWY8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Rnaseh2aQ9CWY8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnaseh2aQ9CWY8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnaseh2aQ9CWY8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnaseh2aQ9CWY8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnaseh2aQ9CWY8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnaseh2aQ9CWY8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnaseh2aQ9CWY8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rnaseh2aQ9CWY8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rnaseh2aQ9CWY8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rnaseh2aQ9CWY8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Rnaseh2aQ9CWY8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms