Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smurf1Q9CUN6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smurf1Q9CUN6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smurf1Q9CUN6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smurf1Q9CUN6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smurf1Q9CUN6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smurf1Q9CUN6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smurf1Q9CUN6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smurf1Q9CUN6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smurf1Q9CUN6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smurf1Q9CUN6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smurf1Q9CUN6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smurf1Q9CUN6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smurf1Q9CUN6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smurf1Q9CUN6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smurf1Q9CUN6 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.33■□□□□ 0.37
Smurf1Q9CUN6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smurf1Q9CUN6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Smurf1Q9CUN6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Smurf1Q9CUN6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smurf1Q9CUN6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.33■□□□□ 0.36
Smurf1Q9CUN6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.33■□□□□ 0.36
Smurf1Q9CUN6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.33■□□□□ 0.36
Smurf1Q9CUN6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smurf1Q9CUN6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smurf1Q9CUN6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smurf1Q9CUN6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smurf1Q9CUN6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smurf1Q9CUN6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smurf1Q9CUN6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smurf1Q9CUN6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Etf1-202ENSMUST00000180351 108 ntBASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.3■□□□□ 0.36
Smurf1Q9CUN6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms