Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CR55 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Q9CR55 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CR55 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CR55 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CR55 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Q9CR55 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.66■□□□□ 0.42
Q9CR55 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Q9CR55 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.66■□□□□ 0.42
Q9CR55 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Q9CR55 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CR55 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.66■□□□□ 0.42
Q9CR55 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CR55 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Q9CR55 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.65■□□□□ 0.42
Q9CR55 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q9CR55 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q9CR55 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q9CR55 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q9CR55 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Q9CR55 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Q9CR55 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Q9CR55 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Q9CR55 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Q9CR55 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Q9CR55 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Q9CR55 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.64■□□□□ 0.41
Q9CR55 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.64■□□□□ 0.41
Q9CR55 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q9CR55 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.63■□□□□ 0.41
Q9CR55 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Q9CR55 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Q9CR55 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Q9CR55 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q9CR55 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CR55 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CR55 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CR55 Gm15546-201ENSMUST00000122095 826 ntBASIC17.62■□□□□ 0.41
Q9CR55 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CR55 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.62■□□□□ 0.41
Q9CR55 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CR55 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Q9CR55 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CR55 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q9CR55 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.61■□□□□ 0.41
Q9CR55 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CR55 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Q9CR55 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CR55 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Q9CR55 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.61■□□□□ 0.41
Q9CR55 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CR55 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CR55 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CR55 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Q9CR55 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CR55 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.61■□□□□ 0.41
Q9CR55 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CR55 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q9CR55 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.6■□□□□ 0.41
Q9CR55 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CR55 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CR55 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CR55 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CR55 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CR55 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Q9CR55 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Q9CR55 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CR55 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CR55 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.6■□□□□ 0.41
Q9CR55 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.6■□□□□ 0.41
Q9CR55 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.6■□□□□ 0.41
Q9CR55 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q9CR55 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Q9CR55 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.6■□□□□ 0.41
Q9CR55 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms