Protein–RNA interactions for Protein: Q9CQC2

Clps, Colipase, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpsQ9CQC2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ClpsQ9CQC2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ClpsQ9CQC2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClpsQ9CQC2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClpsQ9CQC2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ClpsQ9CQC2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ClpsQ9CQC2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClpsQ9CQC2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ClpsQ9CQC2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClpsQ9CQC2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClpsQ9CQC2 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.8■□□□□ 0.6
ClpsQ9CQC2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ClpsQ9CQC2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClpsQ9CQC2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ClpsQ9CQC2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ClpsQ9CQC2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ClpsQ9CQC2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClpsQ9CQC2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.78■□□□□ 0.6
ClpsQ9CQC2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpsQ9CQC2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpsQ9CQC2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ClpsQ9CQC2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ClpsQ9CQC2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ClpsQ9CQC2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ClpsQ9CQC2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClpsQ9CQC2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.77■□□□□ 0.6
ClpsQ9CQC2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.77■□□□□ 0.6
ClpsQ9CQC2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.77■□□□□ 0.6
ClpsQ9CQC2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClpsQ9CQC2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.77■□□□□ 0.6
ClpsQ9CQC2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ClpsQ9CQC2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ClpsQ9CQC2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.76■□□□□ 0.59
ClpsQ9CQC2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ClpsQ9CQC2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
ClpsQ9CQC2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClpsQ9CQC2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ClpsQ9CQC2 Gm6420-201ENSMUST00000193885 723 ntBASIC18.74■□□□□ 0.59
ClpsQ9CQC2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClpsQ9CQC2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClpsQ9CQC2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ClpsQ9CQC2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClpsQ9CQC2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClpsQ9CQC2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClpsQ9CQC2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Nespas-201ENSMUST00000143738 1083 ntBASIC18.72■□□□□ 0.59
ClpsQ9CQC2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.72■□□□□ 0.59
ClpsQ9CQC2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms