Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 AA386476-201ENSMUST00000098781 1665 ntBASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ska1Q9CPV1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ska1Q9CPV1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ska1Q9CPV1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ska1Q9CPV1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ska1Q9CPV1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ska1Q9CPV1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.96■□□□□ 0.47
Ska1Q9CPV1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.96■□□□□ 0.47
Ska1Q9CPV1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.96■□□□□ 0.47
Ska1Q9CPV1 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.96■□□□□ 0.47
Ska1Q9CPV1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.96■□□□□ 0.47
Ska1Q9CPV1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.96■□□□□ 0.47
Ska1Q9CPV1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ska1Q9CPV1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
Ska1Q9CPV1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ska1Q9CPV1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ska1Q9CPV1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ska1Q9CPV1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ska1Q9CPV1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ska1Q9CPV1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.94■□□□□ 0.46
Ska1Q9CPV1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ska1Q9CPV1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
Ska1Q9CPV1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Gm12922-201ENSMUST00000120626 809 ntBASIC17.93■□□□□ 0.46
Ska1Q9CPV1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska1Q9CPV1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska1Q9CPV1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska1Q9CPV1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ska1Q9CPV1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ska1Q9CPV1 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.9■□□□□ 0.46
Ska1Q9CPV1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ska1Q9CPV1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.9■□□□□ 0.46
Ska1Q9CPV1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
Ska1Q9CPV1 Golgb1-201ENSMUST00000023534 498 ntBASIC17.9■□□□□ 0.46
Ska1Q9CPV1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms