Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34aQ99PP6 Gm37563-201ENSMUST00000192580 1513 ntBASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34aQ99PP6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Trim34aQ99PP6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34aQ99PP6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34aQ99PP6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34aQ99PP6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34aQ99PP6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34aQ99PP6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34aQ99PP6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.68■■□□□ 1.38
Trim34aQ99PP6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim34aQ99PP6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim34aQ99PP6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Trim34aQ99PP6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim34aQ99PP6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim34aQ99PP6 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.67■■□□□ 1.38
Trim34aQ99PP6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Trmt13-210ENSMUST00000198454 880 ntBASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34aQ99PP6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34aQ99PP6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Trim34aQ99PP6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34aQ99PP6 Gm44878-201ENSMUST00000205812 1295 ntBASIC23.64■■□□□ 1.37
Trim34aQ99PP6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34aQ99PP6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34aQ99PP6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34aQ99PP6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34aQ99PP6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trim34aQ99PP6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC23.63■■□□□ 1.37
Trim34aQ99PP6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.63■■□□□ 1.37
Trim34aQ99PP6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC23.63■■□□□ 1.37
Trim34aQ99PP6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim34aQ99PP6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim34aQ99PP6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim34aQ99PP6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34aQ99PP6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Gm10252-201ENSMUST00000209541 832 ntBASIC23.61■■□□□ 1.37
Trim34aQ99PP6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34aQ99PP6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms