Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Rnf111Q99ML9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf111Q99ML9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.51■□□□□ 0.55
Rnf111Q99ML9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf111Q99ML9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Grk6-206ENSMUST00000224995 2971 ntBASIC18.5■□□□□ 0.55
Rnf111Q99ML9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf111Q99ML9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf111Q99ML9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf111Q99ML9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf111Q99ML9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf111Q99ML9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf111Q99ML9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf111Q99ML9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf111Q99ML9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms