Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scrt1Q99M85 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scrt1Q99M85 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scrt1Q99M85 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scrt1Q99M85 Gm13168-201ENSMUST00000121771 632 ntBASIC16.73■□□□□ 0.27
Scrt1Q99M85 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.73■□□□□ 0.27
Scrt1Q99M85 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Scrt1Q99M85 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scrt1Q99M85 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scrt1Q99M85 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.73■□□□□ 0.27
Scrt1Q99M85 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scrt1Q99M85 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scrt1Q99M85 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Scrt1Q99M85 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.72■□□□□ 0.27
Scrt1Q99M85 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scrt1Q99M85 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.71■□□□□ 0.27
Scrt1Q99M85 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.71■□□□□ 0.27
Scrt1Q99M85 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scrt1Q99M85 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Gm6365-201ENSMUST00000054711 744 ntBASIC16.71■□□□□ 0.27
Scrt1Q99M85 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scrt1Q99M85 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scrt1Q99M85 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scrt1Q99M85 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scrt1Q99M85 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scrt1Q99M85 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scrt1Q99M85 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.7■□□□□ 0.26
Scrt1Q99M85 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.7■□□□□ 0.26
Scrt1Q99M85 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scrt1Q99M85 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Scrt1Q99M85 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scrt1Q99M85 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scrt1Q99M85 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scrt1Q99M85 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scrt1Q99M85 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Scrt1Q99M85 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Scrt1Q99M85 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Scrt1Q99M85 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scrt1Q99M85 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Scrt1Q99M85 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Gm20049-201ENSMUST00000219950 730 ntBASIC16.68■□□□□ 0.26
Scrt1Q99M85 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scrt1Q99M85 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scrt1Q99M85 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Mir6982-201ENSMUST00000184354 68 ntBASIC16.67■□□□□ 0.26
Scrt1Q99M85 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.67■□□□□ 0.26
Scrt1Q99M85 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scrt1Q99M85 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms