Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.27■□□□□ 0.68
Cttnbp2nlQ99LJ0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Cttnbp2nlQ99LJ0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cttnbp2nlQ99LJ0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cttnbp2nlQ99LJ0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cttnbp2nlQ99LJ0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Gm15820-201ENSMUST00000201566 728 ntBASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cttnbp2nlQ99LJ0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cttnbp2nlQ99LJ0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cttnbp2nlQ99LJ0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Gm7417-201ENSMUST00000192950 473 ntBASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cttnbp2nlQ99LJ0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms