Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col20a1Q923P0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Col20a1Q923P0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.67■■□□□ 1.22
Col20a1Q923P0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Col20a1Q923P0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col20a1Q923P0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col20a1Q923P0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Notumos-201ENSMUST00000151998 2659 ntBASIC22.66■■□□□ 1.22
Col20a1Q923P0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col20a1Q923P0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Col20a1Q923P0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.65■■□□□ 1.22
Col20a1Q923P0 Gm12441-201ENSMUST00000121806 588 ntBASIC22.65■■□□□ 1.22
Col20a1Q923P0 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.65■■□□□ 1.22
Col20a1Q923P0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col20a1Q923P0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Col20a1Q923P0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col20a1Q923P0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col20a1Q923P0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col20a1Q923P0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Col20a1Q923P0 Gm6211-202ENSMUST00000167849 925 ntBASIC22.64■■□□□ 1.22
Col20a1Q923P0 Gm27011-201ENSMUST00000182352 972 ntBASIC22.64■■□□□ 1.22
Col20a1Q923P0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col20a1Q923P0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col20a1Q923P0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col20a1Q923P0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col20a1Q923P0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col20a1Q923P0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col20a1Q923P0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col20a1Q923P0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col20a1Q923P0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col20a1Q923P0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.63■■□□□ 1.21
Col20a1Q923P0 Gm4968-201ENSMUST00000071458 858 ntBASIC22.63■■□□□ 1.21
Col20a1Q923P0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col20a1Q923P0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
Col20a1Q923P0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col20a1Q923P0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col20a1Q923P0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Col20a1Q923P0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col20a1Q923P0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col20a1Q923P0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.61■■□□□ 1.21
Col20a1Q923P0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col20a1Q923P0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col20a1Q923P0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col20a1Q923P0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Col20a1Q923P0 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.6■■□□□ 1.21
Col20a1Q923P0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col20a1Q923P0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col20a1Q923P0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col20a1Q923P0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Col20a1Q923P0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col20a1Q923P0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col20a1Q923P0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.59■■□□□ 1.21
Col20a1Q923P0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.59■■□□□ 1.21
Col20a1Q923P0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col20a1Q923P0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.59■■□□□ 1.21
Col20a1Q923P0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Col20a1Q923P0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col20a1Q923P0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.59■■□□□ 1.21
Col20a1Q923P0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col20a1Q923P0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Col20a1Q923P0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Col20a1Q923P0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col20a1Q923P0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.58■■□□□ 1.21
Col20a1Q923P0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col20a1Q923P0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col20a1Q923P0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Col20a1Q923P0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Col20a1Q923P0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col20a1Q923P0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col20a1Q923P0 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms