Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha9Q91Y11 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha9Q91Y11 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha9Q91Y11 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha9Q91Y11 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha9Q91Y11 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
Pcdha9Q91Y11 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha9Q91Y11 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Pcdha9Q91Y11 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdha9Q91Y11 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha9Q91Y11 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha9Q91Y11 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha9Q91Y11 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha9Q91Y11 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Gm38205-201ENSMUST00000192243 258 ntBASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Reep4-203ENSMUST00000226563 1444 ntBASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdha9Q91Y11 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdha9Q91Y11 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdha9Q91Y11 Gm18284-201ENSMUST00000172604 624 ntBASIC20.33■□□□□ 0.85
Pcdha9Q91Y11 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha9Q91Y11 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdha9Q91Y11 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.33■□□□□ 0.84
Pcdha9Q91Y11 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Gm5874-201ENSMUST00000096101 508 ntBASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdha9Q91Y11 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 Gm13234-201ENSMUST00000120010 747 ntBASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 Gm42778-201ENSMUST00000199644 553 ntBASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha9Q91Y11 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha9Q91Y11 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms