Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdhb18Q91Y02 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.01■□□□□ 0.79
Pcdhb18Q91Y02 Gm5075-201ENSMUST00000196916 622 ntBASIC20.01■□□□□ 0.79
Pcdhb18Q91Y02 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhb18Q91Y02 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.01■□□□□ 0.79
Pcdhb18Q91Y02 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.01■□□□□ 0.79
Pcdhb18Q91Y02 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb18Q91Y02 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb18Q91Y02 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Gm6420-201ENSMUST00000193885 723 ntBASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb18Q91Y02 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb18Q91Y02 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.99■□□□□ 0.79
Pcdhb18Q91Y02 Nespas-201ENSMUST00000143738 1083 ntBASIC19.99■□□□□ 0.79
Pcdhb18Q91Y02 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb18Q91Y02 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb18Q91Y02 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb18Q91Y02 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb18Q91Y02 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb18Q91Y02 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb18Q91Y02 Gm10653-202ENSMUST00000139570 835 ntBASIC19.98■□□□□ 0.79
Pcdhb18Q91Y02 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdhb18Q91Y02 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.98■□□□□ 0.79
Pcdhb18Q91Y02 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdhb18Q91Y02 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb18Q91Y02 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.98■□□□□ 0.79
Pcdhb18Q91Y02 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb18Q91Y02 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb18Q91Y02 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.97■□□□□ 0.79
Pcdhb18Q91Y02 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb18Q91Y02 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb18Q91Y02 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb18Q91Y02 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb18Q91Y02 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb18Q91Y02 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb18Q91Y02 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Gm5408-201ENSMUST00000197998 747 ntBASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb18Q91Y02 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Pcdhb18Q91Y02 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Gm13148-201ENSMUST00000118892 745 ntBASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb18Q91Y02 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Gm13534-201ENSMUST00000121169 513 ntBASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb18Q91Y02 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms