Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhga11Q91XY8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Rarb-207ENSMUST00000225921 2756 ntBASIC18.36■□□□□ 0.53
Pcdhga11Q91XY8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga11Q91XY8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhga11Q91XY8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga11Q91XY8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga11Q91XY8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga11Q91XY8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhga11Q91XY8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pcdhga11Q91XY8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhga11Q91XY8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga11Q91XY8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga11Q91XY8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga11Q91XY8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga11Q91XY8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhga11Q91XY8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdhga11Q91XY8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga11Q91XY8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhga11Q91XY8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga11Q91XY8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdhga11Q91XY8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga11Q91XY8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.31■□□□□ 0.52
Pcdhga11Q91XY8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhga11Q91XY8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms