Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhga4Q91XY4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhga4Q91XY4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga4Q91XY4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhga4Q91XY4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga4Q91XY4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga4Q91XY4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga4Q91XY4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga4Q91XY4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.72■□□□□ 0.59
Pcdhga4Q91XY4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga4Q91XY4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga4Q91XY4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhga4Q91XY4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhga4Q91XY4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhga4Q91XY4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhga4Q91XY4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.65■□□□□ 0.58
Pcdhga4Q91XY4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms