Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1Q91V04 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1Q91V04 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1Q91V04 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tram1Q91V04 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1Q91V04 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1Q91V04 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.45■□□□□ 0.22
Tram1Q91V04 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.44■□□□□ 0.22
Tram1Q91V04 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Tram1Q91V04 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tram1Q91V04 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tram1Q91V04 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1Q91V04 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tram1Q91V04 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tram1Q91V04 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1Q91V04 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tram1Q91V04 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.43■□□□□ 0.22
Tram1Q91V04 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1Q91V04 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1Q91V04 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1Q91V04 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1Q91V04 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1Q91V04 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1Q91V04 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tram1Q91V04 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.42■□□□□ 0.22
Tram1Q91V04 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Tram1Q91V04 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1Q91V04 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Tram1Q91V04 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Tram1Q91V04 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.41■□□□□ 0.22
Tram1Q91V04 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.41■□□□□ 0.22
Tram1Q91V04 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Tram1Q91V04 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.41■□□□□ 0.22
Tram1Q91V04 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tram1Q91V04 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tram1Q91V04 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1Q91V04 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tram1Q91V04 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tram1Q91V04 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tram1Q91V04 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tram1Q91V04 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tram1Q91V04 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tram1Q91V04 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.4■□□□□ 0.22
Tram1Q91V04 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.4■□□□□ 0.22
Tram1Q91V04 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.4■□□□□ 0.22
Tram1Q91V04 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.4■□□□□ 0.22
Tram1Q91V04 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tram1Q91V04 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.4■□□□□ 0.22
Tram1Q91V04 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tram1Q91V04 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tram1Q91V04 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tram1Q91V04 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Tram1Q91V04 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tram1Q91V04 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tram1Q91V04 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms