Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
StrcQ8VIM6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
StrcQ8VIM6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.29■■□□□ 1.32
StrcQ8VIM6 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.29■■□□□ 1.32
StrcQ8VIM6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
StrcQ8VIM6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
StrcQ8VIM6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.29■■□□□ 1.32
StrcQ8VIM6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
StrcQ8VIM6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
StrcQ8VIM6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
StrcQ8VIM6 AC140264.2-202ENSMUST00000218746 817 ntBASIC23.29■■□□□ 1.32
StrcQ8VIM6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
StrcQ8VIM6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
StrcQ8VIM6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
StrcQ8VIM6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.28■■□□□ 1.32
StrcQ8VIM6 Gm10231-201ENSMUST00000181584 441 ntBASIC23.28■■□□□ 1.32
StrcQ8VIM6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
StrcQ8VIM6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.28■■□□□ 1.32
StrcQ8VIM6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
StrcQ8VIM6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
StrcQ8VIM6 Gm10175-202ENSMUST00000208752 441 ntBASIC23.28■■□□□ 1.32
StrcQ8VIM6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.28■■□□□ 1.32
StrcQ8VIM6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC23.28■■□□□ 1.32
StrcQ8VIM6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
StrcQ8VIM6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
StrcQ8VIM6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.28■■□□□ 1.32
StrcQ8VIM6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
StrcQ8VIM6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
StrcQ8VIM6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.27■■□□□ 1.32
StrcQ8VIM6 Gm15378-201ENSMUST00000121894 207 ntBASIC23.27■■□□□ 1.32
StrcQ8VIM6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC23.27■■□□□ 1.32
StrcQ8VIM6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.27■■□□□ 1.32
StrcQ8VIM6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC23.27■■□□□ 1.32
StrcQ8VIM6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
StrcQ8VIM6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
StrcQ8VIM6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
StrcQ8VIM6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
StrcQ8VIM6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
StrcQ8VIM6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
StrcQ8VIM6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
StrcQ8VIM6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
StrcQ8VIM6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
StrcQ8VIM6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
StrcQ8VIM6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.25■■□□□ 1.31
StrcQ8VIM6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
StrcQ8VIM6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
StrcQ8VIM6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
StrcQ8VIM6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
StrcQ8VIM6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
StrcQ8VIM6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
StrcQ8VIM6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
StrcQ8VIM6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
StrcQ8VIM6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
StrcQ8VIM6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
StrcQ8VIM6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.24■■□□□ 1.31
StrcQ8VIM6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
StrcQ8VIM6 Gm10819-201ENSMUST00000099988 561 ntBASIC23.24■■□□□ 1.31
StrcQ8VIM6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
StrcQ8VIM6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
StrcQ8VIM6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
StrcQ8VIM6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
StrcQ8VIM6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.23■■□□□ 1.31
StrcQ8VIM6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
StrcQ8VIM6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
StrcQ8VIM6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
StrcQ8VIM6 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.23■■□□□ 1.31
StrcQ8VIM6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
StrcQ8VIM6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.22■■□□□ 1.31
StrcQ8VIM6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
StrcQ8VIM6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
StrcQ8VIM6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
StrcQ8VIM6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
StrcQ8VIM6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
StrcQ8VIM6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
StrcQ8VIM6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
StrcQ8VIM6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms