Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Gm43530-201ENSMUST00000195920 274 ntBASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Mir6236-201ENSMUST00000184437 123 ntBASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Gm22238-201ENSMUST00000175222 88 ntBASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms