Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh18Q8VHR0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh18Q8VHR0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh18Q8VHR0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh18Q8VHR0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Gm43530-201ENSMUST00000195920 274 ntBASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh18Q8VHR0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Mir6236-201ENSMUST00000184437 123 ntBASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh18Q8VHR0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh18Q8VHR0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh18Q8VHR0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Gm22238-201ENSMUST00000175222 88 ntBASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh18Q8VHR0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms