Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retreg1dQ8VE91 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retreg1dQ8VE91 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.88■□□□□ 0.61
Retreg1dQ8VE91 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retreg1dQ8VE91 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg1dQ8VE91 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Retreg1dQ8VE91 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Retreg1dQ8VE91 Reep4-203ENSMUST00000226563 1444 ntBASIC18.85■□□□□ 0.61
Retreg1dQ8VE91 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg1dQ8VE91 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retreg1dQ8VE91 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg1dQ8VE91 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg1dQ8VE91 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.83■□□□□ 0.61
Retreg1dQ8VE91 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg1dQ8VE91 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg1dQ8VE91 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg1dQ8VE91 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Gm37179-201ENSMUST00000194862 823 ntBASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg1dQ8VE91 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.82■□□□□ 0.6
Retreg1dQ8VE91 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Gm13234-201ENSMUST00000120010 747 ntBASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg1dQ8VE91 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms