Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdt1Q8R4E9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdt1Q8R4E9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdt1Q8R4E9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.46■□□□□ 0.55
Cdt1Q8R4E9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdt1Q8R4E9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdt1Q8R4E9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdt1Q8R4E9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdt1Q8R4E9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdt1Q8R4E9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdt1Q8R4E9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cdt1Q8R4E9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdt1Q8R4E9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Cdt1Q8R4E9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cdt1Q8R4E9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdt1Q8R4E9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdt1Q8R4E9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.42■□□□□ 0.54
Cdt1Q8R4E9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdt1Q8R4E9 Gm9988-201ENSMUST00000069786 435 ntBASIC18.42■□□□□ 0.54
Cdt1Q8R4E9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdt1Q8R4E9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdt1Q8R4E9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdt1Q8R4E9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdt1Q8R4E9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdt1Q8R4E9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cdt1Q8R4E9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdt1Q8R4E9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms