Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.55■□□□□ 0.88
Vopp1Q8R1C3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Gm5408-201ENSMUST00000197998 747 ntBASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vopp1Q8R1C3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vopp1Q8R1C3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vopp1Q8R1C3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vopp1Q8R1C3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vopp1Q8R1C3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vopp1Q8R1C3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vopp1Q8R1C3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.52■□□□□ 0.88
Vopp1Q8R1C3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vopp1Q8R1C3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vopp1Q8R1C3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vopp1Q8R1C3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vopp1Q8R1C3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Gm37856-201ENSMUST00000191634 999 ntBASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vopp1Q8R1C3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vopp1Q8R1C3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vopp1Q8R1C3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Rab3c-203ENSMUST00000224180 967 ntBASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vopp1Q8R1C3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms