Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Treml1Q8K558 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Treml1Q8K558 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.86■□□□□ 0.61
Treml1Q8K558 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Treml1Q8K558 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Treml1Q8K558 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Treml1Q8K558 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Treml1Q8K558 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.85■□□□□ 0.61
Treml1Q8K558 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Treml1Q8K558 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Treml1Q8K558 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Treml1Q8K558 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Reep4-203ENSMUST00000226563 1444 ntBASIC18.84■□□□□ 0.61
Treml1Q8K558 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.84■□□□□ 0.61
Treml1Q8K558 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.84■□□□□ 0.61
Treml1Q8K558 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.84■□□□□ 0.61
Treml1Q8K558 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Treml1Q8K558 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Treml1Q8K558 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Treml1Q8K558 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Treml1Q8K558 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Treml1Q8K558 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.83■□□□□ 0.61
Treml1Q8K558 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Treml1Q8K558 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Treml1Q8K558 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Treml1Q8K558 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.83■□□□□ 0.6
Treml1Q8K558 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Treml1Q8K558 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Treml1Q8K558 Gm5874-201ENSMUST00000096101 508 ntBASIC18.83■□□□□ 0.6
Treml1Q8K558 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
Treml1Q8K558 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Treml1Q8K558 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Treml1Q8K558 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Treml1Q8K558 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Treml1Q8K558 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Treml1Q8K558 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Treml1Q8K558 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Treml1Q8K558 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Treml1Q8K558 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.82■□□□□ 0.6
Treml1Q8K558 Gm38205-201ENSMUST00000192243 258 ntBASIC18.82■□□□□ 0.6
Treml1Q8K558 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.82■□□□□ 0.6
Treml1Q8K558 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Treml1Q8K558 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Treml1Q8K558 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Treml1Q8K558 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Treml1Q8K558 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Treml1Q8K558 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Treml1Q8K558 Gm18284-201ENSMUST00000172604 624 ntBASIC18.81■□□□□ 0.6
Treml1Q8K558 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.81■□□□□ 0.6
Treml1Q8K558 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.81■□□□□ 0.6
Treml1Q8K558 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.81■□□□□ 0.6
Treml1Q8K558 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Treml1Q8K558 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Treml1Q8K558 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Treml1Q8K558 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Treml1Q8K558 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Treml1Q8K558 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Treml1Q8K558 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Treml1Q8K558 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Treml1Q8K558 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Treml1Q8K558 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Treml1Q8K558 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Treml1Q8K558 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Treml1Q8K558 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Treml1Q8K558 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.8■□□□□ 0.6
Treml1Q8K558 Gm10493-201ENSMUST00000097270 612 ntBASIC18.8■□□□□ 0.6
Treml1Q8K558 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Treml1Q8K558 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Treml1Q8K558 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Treml1Q8K558 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Treml1Q8K558 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Treml1Q8K558 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Treml1Q8K558 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Treml1Q8K558 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Treml1Q8K558 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Treml1Q8K558 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.79■□□□□ 0.6
Treml1Q8K558 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Treml1Q8K558 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Treml1Q8K558 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Treml1Q8K558 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Treml1Q8K558 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Treml1Q8K558 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Treml1Q8K558 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Treml1Q8K558 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Treml1Q8K558 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Treml1Q8K558 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Treml1Q8K558 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.77■□□□□ 0.6
Treml1Q8K558 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Treml1Q8K558 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Treml1Q8K558 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Treml1Q8K558 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Treml1Q8K558 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms