Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Notumos-201ENSMUST00000151998 2659 ntBASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.81■□□□□ 0.6
Alms1Q8K4E0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Alms1Q8K4E0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Gm6211-202ENSMUST00000167849 925 ntBASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alms1Q8K4E0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alms1Q8K4E0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Alms1Q8K4E0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Alms1Q8K4E0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Alms1Q8K4E0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alms1Q8K4E0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alms1Q8K4E0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Alms1Q8K4E0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alms1Q8K4E0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alms1Q8K4E0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alms1Q8K4E0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alms1Q8K4E0 Golph3-202ENSMUST00000226517 2359 ntBASIC18.76■□□□□ 0.59
Alms1Q8K4E0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.76■□□□□ 0.59
Alms1Q8K4E0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alms1Q8K4E0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Alms1Q8K4E0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alms1Q8K4E0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Alms1Q8K4E0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.75■□□□□ 0.59
Alms1Q8K4E0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms