Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.03■□□□□ 0.48
Clrn1Q8K445 Gm27801-201ENSMUST00000184174 223 ntBASIC18.03■□□□□ 0.48
Clrn1Q8K445 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn1Q8K445 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Clrn1Q8K445 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn1Q8K445 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn1Q8K445 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn1Q8K445 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn1Q8K445 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn1Q8K445 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.02■□□□□ 0.48
Clrn1Q8K445 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn1Q8K445 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn1Q8K445 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn1Q8K445 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clrn1Q8K445 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.01■□□□□ 0.47
Clrn1Q8K445 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clrn1Q8K445 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn1Q8K445 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clrn1Q8K445 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Clrn1Q8K445 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18■□□□□ 0.47
Clrn1Q8K445 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Clrn1Q8K445 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clrn1Q8K445 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18■□□□□ 0.47
Clrn1Q8K445 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn1Q8K445 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn1Q8K445 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn1Q8K445 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clrn1Q8K445 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn1Q8K445 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.99■□□□□ 0.47
Clrn1Q8K445 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.99■□□□□ 0.47
Clrn1Q8K445 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn1Q8K445 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn1Q8K445 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Clrn1Q8K445 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.99■□□□□ 0.47
Clrn1Q8K445 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clrn1Q8K445 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Clrn1Q8K445 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Clrn1Q8K445 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.98■□□□□ 0.47
Clrn1Q8K445 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clrn1Q8K445 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Clrn1Q8K445 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn1Q8K445 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn1Q8K445 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clrn1Q8K445 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clrn1Q8K445 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Clrn1Q8K445 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
Clrn1Q8K445 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms