Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Prpf39Q8K2Z2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf39Q8K2Z2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf39Q8K2Z2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf39Q8K2Z2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf39Q8K2Z2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf39Q8K2Z2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Prpf39Q8K2Z2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf39Q8K2Z2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf39Q8K2Z2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf39Q8K2Z2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf39Q8K2Z2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.84■□□□□ 0.77
Prpf39Q8K2Z2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.84■□□□□ 0.77
Prpf39Q8K2Z2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.84■□□□□ 0.77
Prpf39Q8K2Z2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf39Q8K2Z2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf39Q8K2Z2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.83■□□□□ 0.77
Prpf39Q8K2Z2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.83■□□□□ 0.77
Prpf39Q8K2Z2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Prpf39Q8K2Z2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf39Q8K2Z2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf39Q8K2Z2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf39Q8K2Z2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Prpf39Q8K2Z2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf39Q8K2Z2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Prpf39Q8K2Z2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf39Q8K2Z2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf39Q8K2Z2 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.81■□□□□ 0.76
Prpf39Q8K2Z2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prpf39Q8K2Z2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf39Q8K2Z2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Prpf39Q8K2Z2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf39Q8K2Z2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.8■□□□□ 0.76
Prpf39Q8K2Z2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.8■□□□□ 0.76
Prpf39Q8K2Z2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf39Q8K2Z2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf39Q8K2Z2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf39Q8K2Z2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prpf39Q8K2Z2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prpf39Q8K2Z2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.78■□□□□ 0.76
Prpf39Q8K2Z2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf39Q8K2Z2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf39Q8K2Z2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Prpf39Q8K2Z2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.78■□□□□ 0.76
Prpf39Q8K2Z2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prpf39Q8K2Z2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prpf39Q8K2Z2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Prpf39Q8K2Z2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.78■□□□□ 0.76
Prpf39Q8K2Z2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf39Q8K2Z2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf39Q8K2Z2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf39Q8K2Z2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf39Q8K2Z2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf39Q8K2Z2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf39Q8K2Z2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prpf39Q8K2Z2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Prpf39Q8K2Z2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms