Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim68Q8K243 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim68Q8K243 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim68Q8K243 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim68Q8K243 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim68Q8K243 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.64■□□□□ 0.89
Trim68Q8K243 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim68Q8K243 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim68Q8K243 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim68Q8K243 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim68Q8K243 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim68Q8K243 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trim68Q8K243 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim68Q8K243 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim68Q8K243 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim68Q8K243 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim68Q8K243 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trim68Q8K243 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trim68Q8K243 Gm13148-201ENSMUST00000118892 745 ntBASIC20.63■□□□□ 0.89
Trim68Q8K243 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.63■□□□□ 0.89
Trim68Q8K243 Gm5408-201ENSMUST00000197998 747 ntBASIC20.63■□□□□ 0.89
Trim68Q8K243 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim68Q8K243 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim68Q8K243 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim68Q8K243 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim68Q8K243 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trim68Q8K243 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.62■□□□□ 0.89
Trim68Q8K243 Gm22325-201ENSMUST00000158904 308 ntBASIC20.62■□□□□ 0.89
Trim68Q8K243 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.62■□□□□ 0.89
Trim68Q8K243 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.62■□□□□ 0.89
Trim68Q8K243 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim68Q8K243 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim68Q8K243 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim68Q8K243 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim68Q8K243 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim68Q8K243 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim68Q8K243 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim68Q8K243 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim68Q8K243 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim68Q8K243 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim68Q8K243 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim68Q8K243 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.6■□□□□ 0.89
Trim68Q8K243 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim68Q8K243 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.6■□□□□ 0.89
Trim68Q8K243 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim68Q8K243 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.6■□□□□ 0.89
Trim68Q8K243 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim68Q8K243 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.59■□□□□ 0.89
Trim68Q8K243 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim68Q8K243 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.59■□□□□ 0.89
Trim68Q8K243 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.59■□□□□ 0.89
Trim68Q8K243 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 Gm13168-201ENSMUST00000121771 632 ntBASIC20.59■□□□□ 0.89
Trim68Q8K243 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.59■□□□□ 0.89
Trim68Q8K243 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim68Q8K243 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim68Q8K243 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim68Q8K243 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim68Q8K243 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.58■□□□□ 0.89
Trim68Q8K243 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim68Q8K243 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim68Q8K243 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim68Q8K243 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim68Q8K243 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim68Q8K243 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Trim68Q8K243 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim68Q8K243 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim68Q8K243 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim68Q8K243 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim68Q8K243 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.57■□□□□ 0.88
Trim68Q8K243 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim68Q8K243 Gm6365-201ENSMUST00000054711 744 ntBASIC20.57■□□□□ 0.88
Trim68Q8K243 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim68Q8K243 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim68Q8K243 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim68Q8K243 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim68Q8K243 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim68Q8K243 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim68Q8K243 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim68Q8K243 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms