Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Gm6365-201ENSMUST00000054711 744 ntBASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Nespas-201ENSMUST00000143738 1083 ntBASIC20.12■□□□□ 0.81
Trim61Q8JZK6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim61Q8JZK6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim61Q8JZK6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.11■□□□□ 0.81
Trim61Q8JZK6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim61Q8JZK6 Gm10653-202ENSMUST00000139570 835 ntBASIC20.11■□□□□ 0.81
Trim61Q8JZK6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim61Q8JZK6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim61Q8JZK6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.11■□□□□ 0.81
Trim61Q8JZK6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.11■□□□□ 0.81
Trim61Q8JZK6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim61Q8JZK6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trim61Q8JZK6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim61Q8JZK6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim61Q8JZK6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Trim61Q8JZK6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.08■□□□□ 0.81
Trim61Q8JZK6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim61Q8JZK6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim61Q8JZK6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Trim61Q8JZK6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trim61Q8JZK6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trim61Q8JZK6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim61Q8JZK6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim61Q8JZK6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Trim61Q8JZK6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Gm5408-201ENSMUST00000197998 747 ntBASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim61Q8JZK6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.06■□□□□ 0.8
Trim61Q8JZK6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim61Q8JZK6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim61Q8JZK6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim61Q8JZK6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim61Q8JZK6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms