Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp28Q8CGV8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp28Q8CGV8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Gm10232-201ENSMUST00000089221 720 ntBASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Mmp28Q8CGV8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp28Q8CGV8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.27■□□□□ 0.2
Mmp28Q8CGV8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp28Q8CGV8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp28Q8CGV8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Mmp28Q8CGV8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Mmp28Q8CGV8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Mmp28Q8CGV8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.27■□□□□ 0.19
Mmp28Q8CGV8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp28Q8CGV8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.27■□□□□ 0.19
Mmp28Q8CGV8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp28Q8CGV8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Mmp28Q8CGV8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp28Q8CGV8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp28Q8CGV8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp28Q8CGV8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms