Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Smc5Q8CG46 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Smc5Q8CG46 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Smc5Q8CG46 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC23.74■■□□□ 1.39
Smc5Q8CG46 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Rps24-207ENSMUST00000224568 714 ntBASIC23.73■■□□□ 1.39
Smc5Q8CG46 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc5Q8CG46 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc5Q8CG46 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc5Q8CG46 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Smc5Q8CG46 Dmtn-210ENSMUST00000228824 2377 ntBASIC23.72■■□□□ 1.39
Smc5Q8CG46 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc5Q8CG46 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.72■■□□□ 1.39
Smc5Q8CG46 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc5Q8CG46 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Smc5Q8CG46 Gm15853-202ENSMUST00000195518 2041 ntBASIC23.72■■□□□ 1.39
Smc5Q8CG46 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc5Q8CG46 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Smc5Q8CG46 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc5Q8CG46 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.7■■□□□ 1.39
Smc5Q8CG46 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc5Q8CG46 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Smc5Q8CG46 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc5Q8CG46 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc5Q8CG46 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc5Q8CG46 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC23.7■■□□□ 1.38
Smc5Q8CG46 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Smc5Q8CG46 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
Smc5Q8CG46 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc5Q8CG46 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Smc5Q8CG46 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc5Q8CG46 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Smc5Q8CG46 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC23.69■■□□□ 1.38
Smc5Q8CG46 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.69■■□□□ 1.38
Smc5Q8CG46 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc5Q8CG46 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc5Q8CG46 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc5Q8CG46 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Smc5Q8CG46 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smc5Q8CG46 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Smc5Q8CG46 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
Smc5Q8CG46 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
Smc5Q8CG46 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Smc5Q8CG46 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.68■■□□□ 1.38
Smc5Q8CG46 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.68■■□□□ 1.38
Smc5Q8CG46 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Smc5Q8CG46 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc5Q8CG46 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smc5Q8CG46 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
Smc5Q8CG46 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Grk6-206ENSMUST00000224995 2971 ntBASIC23.67■■□□□ 1.38
Smc5Q8CG46 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smc5Q8CG46 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Smc5Q8CG46 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc5Q8CG46 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc5Q8CG46 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc5Q8CG46 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc5Q8CG46 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Smc5Q8CG46 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc5Q8CG46 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smc5Q8CG46 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smc5Q8CG46 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms