Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rsph6aQ8CDR2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rsph6aQ8CDR2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rsph6aQ8CDR2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rsph6aQ8CDR2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Rsph6aQ8CDR2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC25.06■■□□□ 1.6
Rsph6aQ8CDR2 Gm45640-201ENSMUST00000210665 1896 ntBASIC25.06■■□□□ 1.6
Rsph6aQ8CDR2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rsph6aQ8CDR2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rsph6aQ8CDR2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
Rsph6aQ8CDR2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rsph6aQ8CDR2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rsph6aQ8CDR2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Rsph6aQ8CDR2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rsph6aQ8CDR2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rsph6aQ8CDR2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rsph6aQ8CDR2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC25.04■■□□□ 1.6
Rsph6aQ8CDR2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Rsph6aQ8CDR2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rsph6aQ8CDR2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25.04■■□□□ 1.6
Rsph6aQ8CDR2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rsph6aQ8CDR2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rsph6aQ8CDR2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rsph6aQ8CDR2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rsph6aQ8CDR2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Rsph6aQ8CDR2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rsph6aQ8CDR2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rsph6aQ8CDR2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rsph6aQ8CDR2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Gm26971-201ENSMUST00000182423 1072 ntBASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Gm3807-201ENSMUST00000193520 1168 ntBASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rsph6aQ8CDR2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Gm12527-201ENSMUST00000117967 564 ntBASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Gm34220-201ENSMUST00000223001 2709 ntBASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rsph6aQ8CDR2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Gm10653-202ENSMUST00000139570 835 ntBASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Rsph6aQ8CDR2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 Gm5408-201ENSMUST00000197998 747 ntBASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rsph6aQ8CDR2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Rsph6aQ8CDR2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rsph6aQ8CDR2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC24.98■■□□□ 1.59
Rsph6aQ8CDR2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rsph6aQ8CDR2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rsph6aQ8CDR2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Rsph6aQ8CDR2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Rsph6aQ8CDR2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 Gm26524-201ENSMUST00000192339 390 ntBASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 Gm37352-201ENSMUST00000193908 2181 ntBASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Rsph6aQ8CDR2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Rsph6aQ8CDR2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rsph6aQ8CDR2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rsph6aQ8CDR2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rsph6aQ8CDR2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rsph6aQ8CDR2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Rsph6aQ8CDR2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rsph6aQ8CDR2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms