Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
Cps1Q8C196 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC26.17■■□□□ 1.78
Cps1Q8C196 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cps1Q8C196 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cps1Q8C196 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cps1Q8C196 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cps1Q8C196 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Cps1Q8C196 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cps1Q8C196 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Cps1Q8C196 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC26.17■■□□□ 1.78
Cps1Q8C196 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cps1Q8C196 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cps1Q8C196 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC26.16■■□□□ 1.78
Cps1Q8C196 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cps1Q8C196 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
Cps1Q8C196 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cps1Q8C196 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cps1Q8C196 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Cps1Q8C196 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cps1Q8C196 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
Cps1Q8C196 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Cps1Q8C196 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cps1Q8C196 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Cps1Q8C196 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Cps1Q8C196 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC26.14■■□□□ 1.78
Cps1Q8C196 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC26.14■■□□□ 1.78
Cps1Q8C196 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC26.14■■□□□ 1.78
Cps1Q8C196 Arhgef33-211ENSMUST00000225658 473 ntBASIC26.14■■□□□ 1.78
Cps1Q8C196 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Cps1Q8C196 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cps1Q8C196 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cps1Q8C196 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cps1Q8C196 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Cps1Q8C196 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
Cps1Q8C196 Gm18666-201ENSMUST00000190039 958 ntBASIC26.14■■□□□ 1.77
Cps1Q8C196 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC26.14■■□□□ 1.77
Cps1Q8C196 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Cps1Q8C196 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cps1Q8C196 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC26.13■■□□□ 1.77
Cps1Q8C196 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cps1Q8C196 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Cps1Q8C196 Gm9484-201ENSMUST00000195892 1159 ntBASIC26.13■■□□□ 1.77
Cps1Q8C196 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC26.13■■□□□ 1.77
Cps1Q8C196 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cps1Q8C196 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cps1Q8C196 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Cps1Q8C196 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Cps1Q8C196 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Cps1Q8C196 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Cps1Q8C196 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Cps1Q8C196 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Cps1Q8C196 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
Cps1Q8C196 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Cps1Q8C196 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Cps1Q8C196 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC26.11■■□□□ 1.77
Cps1Q8C196 Krtap5-1-202ENSMUST00000188274 742 ntBASIC26.11■■□□□ 1.77
Cps1Q8C196 Gm37055-201ENSMUST00000191866 133 ntBASIC26.11■■□□□ 1.77
Cps1Q8C196 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
Cps1Q8C196 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cps1Q8C196 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cps1Q8C196 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC26.1■■□□□ 1.77
Cps1Q8C196 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Cps1Q8C196 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
Cps1Q8C196 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC26.09■■□□□ 1.77
Cps1Q8C196 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Cps1Q8C196 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Cps1Q8C196 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
Cps1Q8C196 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC26.09■■□□□ 1.77
Cps1Q8C196 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Cps1Q8C196 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Cps1Q8C196 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC26.09■■□□□ 1.77
Cps1Q8C196 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Cps1Q8C196 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Cps1Q8C196 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Cps1Q8C196 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cps1Q8C196 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cps1Q8C196 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cps1Q8C196 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cps1Q8C196 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cps1Q8C196 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cps1Q8C196 AC140264.2-202ENSMUST00000218746 817 ntBASIC26.08■■□□□ 1.77
Cps1Q8C196 AC163280.1-201ENSMUST00000228194 1100 ntBASIC26.08■■□□□ 1.77
Cps1Q8C196 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Cps1Q8C196 Gm20100-201ENSMUST00000209418 2272 ntBASIC26.07■■□□□ 1.76
Cps1Q8C196 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Cps1Q8C196 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Cps1Q8C196 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Cps1Q8C196 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC26.07■■□□□ 1.76
Cps1Q8C196 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Cps1Q8C196 Gm19094-201ENSMUST00000209791 1246 ntBASIC26.07■■□□□ 1.76
Cps1Q8C196 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Cps1Q8C196 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Cps1Q8C196 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Cps1Q8C196 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cps1Q8C196 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC26.06■■□□□ 1.76
Cps1Q8C196 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC26.06■■□□□ 1.76
Cps1Q8C196 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC26.06■■□□□ 1.76
Cps1Q8C196 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC26.06■■□□□ 1.76
Cps1Q8C196 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cps1Q8C196 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms