Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3rf3Q8C120 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3rf3Q8C120 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.9■□□□□ 0.78
Sh3rf3Q8C120 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3rf3Q8C120 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3rf3Q8C120 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sh3rf3Q8C120 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3rf3Q8C120 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3rf3Q8C120 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sh3rf3Q8C120 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sh3rf3Q8C120 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3rf3Q8C120 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3rf3Q8C120 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3rf3Q8C120 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Sh3rf3Q8C120 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.89■□□□□ 0.77
Sh3rf3Q8C120 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3rf3Q8C120 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3rf3Q8C120 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Sh3rf3Q8C120 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3rf3Q8C120 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3rf3Q8C120 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3rf3Q8C120 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3rf3Q8C120 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3rf3Q8C120 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf3Q8C120 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf3Q8C120 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf3Q8C120 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3rf3Q8C120 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3rf3Q8C120 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3rf3Q8C120 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3rf3Q8C120 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3rf3Q8C120 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Sh3rf3Q8C120 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Sh3rf3Q8C120 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.83■□□□□ 0.77
Sh3rf3Q8C120 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.83■□□□□ 0.77
Sh3rf3Q8C120 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3rf3Q8C120 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms