Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim35Q8C006 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim35Q8C006 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim35Q8C006 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim35Q8C006 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim35Q8C006 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim35Q8C006 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim35Q8C006 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim35Q8C006 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim35Q8C006 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim35Q8C006 Gm8493-201ENSMUST00000196881 489 ntBASIC19.44■□□□□ 0.7
Trim35Q8C006 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim35Q8C006 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim35Q8C006 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim35Q8C006 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim35Q8C006 Gm43435-201ENSMUST00000199996 1438 ntBASIC19.43■□□□□ 0.7
Trim35Q8C006 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
Trim35Q8C006 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 Gm12251-201ENSMUST00000117893 792 ntBASIC19.43■□□□□ 0.7
Trim35Q8C006 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.43■□□□□ 0.7
Trim35Q8C006 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim35Q8C006 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim35Q8C006 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.42■□□□□ 0.7
Trim35Q8C006 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim35Q8C006 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim35Q8C006 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Trim35Q8C006 Gm43173-201ENSMUST00000202246 593 ntBASIC19.42■□□□□ 0.7
Trim35Q8C006 Spcs1-204ENSMUST00000226782 949 ntBASIC19.42■□□□□ 0.7
Trim35Q8C006 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim35Q8C006 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.42■□□□□ 0.7
Trim35Q8C006 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim35Q8C006 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim35Q8C006 Gm14542-201ENSMUST00000118460 1248 ntBASIC19.41■□□□□ 0.7
Trim35Q8C006 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC19.41■□□□□ 0.7
Trim35Q8C006 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.41■□□□□ 0.7
Trim35Q8C006 Gm18363-201ENSMUST00000221671 730 ntBASIC19.41■□□□□ 0.7
Trim35Q8C006 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim35Q8C006 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim35Q8C006 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim35Q8C006 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim35Q8C006 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim35Q8C006 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim35Q8C006 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim35Q8C006 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.41■□□□□ 0.7
Trim35Q8C006 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.41■□□□□ 0.7
Trim35Q8C006 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim35Q8C006 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim35Q8C006 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim35Q8C006 Gm8312-201ENSMUST00000119380 618 ntBASIC19.4■□□□□ 0.7
Trim35Q8C006 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.4■□□□□ 0.7
Trim35Q8C006 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim35Q8C006 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim35Q8C006 Gm42535-201ENSMUST00000197312 1399 ntBASIC19.4■□□□□ 0.7
Trim35Q8C006 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim35Q8C006 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim35Q8C006 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Trim35Q8C006 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim35Q8C006 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim35Q8C006 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim35Q8C006 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim35Q8C006 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim35Q8C006 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.39■□□□□ 0.69
Trim35Q8C006 Gm14716-201ENSMUST00000120138 718 ntBASIC19.39■□□□□ 0.69
Trim35Q8C006 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC19.39■□□□□ 0.69
Trim35Q8C006 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim35Q8C006 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim35Q8C006 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim35Q8C006 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim35Q8C006 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim35Q8C006 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim35Q8C006 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim35Q8C006 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim35Q8C006 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim35Q8C006 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim35Q8C006 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim35Q8C006 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim35Q8C006 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Trim35Q8C006 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim35Q8C006 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim35Q8C006 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms